Serveur d'exploration Phytophthora

Attention, ce site est en cours de développement !
Attention, site généré par des moyens informatiques à partir de corpus bruts.
Les informations ne sont donc pas validées.

First Report of Root Rot of Chicory Caused by Phytophthora cryptogea in Chile.

Identifieur interne : 001527 ( Main/Exploration ); précédent : 001526; suivant : 001528

First Report of Root Rot of Chicory Caused by Phytophthora cryptogea in Chile.

Auteurs : M. Vargas [Chili] ; C. Loyola [Chili] ; N. Zapata [Chili] ; V. Rivera ; G. Secor ; M. Bolton [États-Unis] ; A. France [Chili]

Source :

RBID : pubmed:30727403

Abstract

Chicory (Cichorium intybus L. var sativum Bisch.), a relatively new high-value crop in Chile, was introduced for commercial production of inulin. Inulins are polysaccharides extracted from chicory tap roots that are used in processed foods because of their beneficial gastrointestinal properties. Approximately 3,000 ha of chicory are grown for local processing in the BioBio Region near Chillan in south central Chile. Recently, a severe rot of 1 to 3% of mature roots in the field and after harvest has been observed in most fields, which caused yield and quality losses. Typical symptoms include a brown discoloration and a soft, watery decay of the root. Tissue pieces from symptomatic roots were placed on water agar and clarified V8 juice agar medium amended with antibiotics (1) for isolation of the causal pathogen. A Phytopthora sp. had been consistently isolated from root lesions, and axenic cultures were obtained using single-hypha transfers. The species was provisionally identified as Phytopthora cryptogea (Pethybridge and Lafferty, 1919) on the basis of morphological and cultural characteristics (1). Mycelia grew between 5 and 30°C with optimal growth at 20 to 25°C and no growth at 35°C. All isolates produced hyphal swellings and nonpapillate, persistent, internally proliferating, and ovoid to obpyriform sporangia with mean dimensions of 45 × 31 μm in sterile soil extract. The isolates were of A1 mating type because they produced oospores only when paired with reference isolates of P. cinnamomi A2 on clarified V8 juice agar amended with thiamine, tryptophan, and β-sitosterol (1) after 20 days at 20°C in the dark. On the basis of morphological and sequence data from cytochrome c oxidase subunit 1 and 2, internal transcribed spacer 2, and β-tubulin (GenBank Accession Nos. JQ037796 to JQ037798, respectively), the pathogen was identified as P. cryptogea. Pathogenicity tests were conducted using three isolates of P. cryptogea by placing a 7-mm-diameter disk from a 1-week-old V8 agar culture on 10 wounded and nonwounded healthy chicory roots (2). Control roots were mock inoculated with agar plugs. The inoculated roots were incubated at 20°C in a moist chamber. Root rot symptoms, identical to those observed both in field and storage, developed after 4 to 6 days only on wounded sites inoculated with the pathogen, and P. cryptogea was reisolated from these inoculated plants. Mock-inoculated roots remained healthy. This experiment was completed twice and similar results were obtained. To our knowledge, this is the first report of Phytophthora root rot of chicory caused by P. cryptogea in Chile. References: (1) D. C. Erwin and O. K. Ribeiro. Phytophthora Diseases Worldwide. The American Phytopathological Society, St. Paul, MN, 1996. (2) M. E. Stanghellini and W. C. Kronland. Plant Dis. 66:262, 1982.

DOI: 10.1094/PDIS-03-11-0245
PubMed: 30727403


Affiliations:


Links toward previous steps (curation, corpus...)


Le document en format XML

<record>
<TEI>
<teiHeader>
<fileDesc>
<titleStmt>
<title xml:lang="en">First Report of Root Rot of Chicory Caused by Phytophthora cryptogea in Chile.</title>
<author>
<name sortKey="Vargas, M" sort="Vargas, M" uniqKey="Vargas M" first="M" last="Vargas">M. Vargas</name>
<affiliation wicri:level="1">
<nlm:affiliation>Facultad de Agronomía, Universidad de Concepción, Chillán, Chile.</nlm:affiliation>
<country xml:lang="fr">Chili</country>
<wicri:regionArea>Facultad de Agronomía, Universidad de Concepción, Chillán</wicri:regionArea>
<wicri:noRegion>Chillán</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Loyola, C" sort="Loyola, C" uniqKey="Loyola C" first="C" last="Loyola">C. Loyola</name>
<affiliation wicri:level="1">
<nlm:affiliation>Facultad de Agronomía, Universidad de Concepción, Chillán, Chile.</nlm:affiliation>
<country xml:lang="fr">Chili</country>
<wicri:regionArea>Facultad de Agronomía, Universidad de Concepción, Chillán</wicri:regionArea>
<wicri:noRegion>Chillán</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Zapata, N" sort="Zapata, N" uniqKey="Zapata N" first="N" last="Zapata">N. Zapata</name>
<affiliation wicri:level="1">
<nlm:affiliation>Facultad de Agronomía, Universidad de Concepción, Chillán, Chile.</nlm:affiliation>
<country xml:lang="fr">Chili</country>
<wicri:regionArea>Facultad de Agronomía, Universidad de Concepción, Chillán</wicri:regionArea>
<wicri:noRegion>Chillán</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Rivera, V" sort="Rivera, V" uniqKey="Rivera V" first="V" last="Rivera">V. Rivera</name>
<affiliation>
<nlm:affiliation>North Dakota State University, Fargo 58108.</nlm:affiliation>
<wicri:noCountry code="subField">Fargo 58108</wicri:noCountry>
</affiliation>
</author>
<author>
<name sortKey="Secor, G" sort="Secor, G" uniqKey="Secor G" first="G" last="Secor">G. Secor</name>
<affiliation>
<nlm:affiliation>North Dakota State University, Fargo 58108.</nlm:affiliation>
<wicri:noCountry code="subField">Fargo 58108</wicri:noCountry>
</affiliation>
</author>
<author>
<name sortKey="Bolton, M" sort="Bolton, M" uniqKey="Bolton M" first="M" last="Bolton">M. Bolton</name>
<affiliation wicri:level="2">
<nlm:affiliation>USDA-ARS, Northern Crop Science Lab, Fargo, ND.</nlm:affiliation>
<country xml:lang="fr">États-Unis</country>
<placeName>
<region type="state">Dakota du Nord</region>
</placeName>
<wicri:cityArea>USDA-ARS, Northern Crop Science Lab, Fargo</wicri:cityArea>
</affiliation>
</author>
<author>
<name sortKey="France, A" sort="France, A" uniqKey="France A" first="A" last="France">A. France</name>
<affiliation wicri:level="1">
<nlm:affiliation>Instituto de Investigaciones Agropecuarias, Chillán, Chile.</nlm:affiliation>
<country xml:lang="fr">Chili</country>
<wicri:regionArea>Instituto de Investigaciones Agropecuarias, Chillán</wicri:regionArea>
<wicri:noRegion>Chillán</wicri:noRegion>
</affiliation>
</author>
</titleStmt>
<publicationStmt>
<idno type="wicri:source">PubMed</idno>
<date when="2012">2012</date>
<idno type="RBID">pubmed:30727403</idno>
<idno type="pmid">30727403</idno>
<idno type="doi">10.1094/PDIS-03-11-0245</idno>
<idno type="wicri:Area/Main/Corpus">001535</idno>
<idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">001535</idno>
<idno type="wicri:Area/Main/Curation">001535</idno>
<idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Curation">001535</idno>
<idno type="wicri:Area/Main/Exploration">001535</idno>
</publicationStmt>
<sourceDesc>
<biblStruct>
<analytic>
<title xml:lang="en">First Report of Root Rot of Chicory Caused by Phytophthora cryptogea in Chile.</title>
<author>
<name sortKey="Vargas, M" sort="Vargas, M" uniqKey="Vargas M" first="M" last="Vargas">M. Vargas</name>
<affiliation wicri:level="1">
<nlm:affiliation>Facultad de Agronomía, Universidad de Concepción, Chillán, Chile.</nlm:affiliation>
<country xml:lang="fr">Chili</country>
<wicri:regionArea>Facultad de Agronomía, Universidad de Concepción, Chillán</wicri:regionArea>
<wicri:noRegion>Chillán</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Loyola, C" sort="Loyola, C" uniqKey="Loyola C" first="C" last="Loyola">C. Loyola</name>
<affiliation wicri:level="1">
<nlm:affiliation>Facultad de Agronomía, Universidad de Concepción, Chillán, Chile.</nlm:affiliation>
<country xml:lang="fr">Chili</country>
<wicri:regionArea>Facultad de Agronomía, Universidad de Concepción, Chillán</wicri:regionArea>
<wicri:noRegion>Chillán</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Zapata, N" sort="Zapata, N" uniqKey="Zapata N" first="N" last="Zapata">N. Zapata</name>
<affiliation wicri:level="1">
<nlm:affiliation>Facultad de Agronomía, Universidad de Concepción, Chillán, Chile.</nlm:affiliation>
<country xml:lang="fr">Chili</country>
<wicri:regionArea>Facultad de Agronomía, Universidad de Concepción, Chillán</wicri:regionArea>
<wicri:noRegion>Chillán</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Rivera, V" sort="Rivera, V" uniqKey="Rivera V" first="V" last="Rivera">V. Rivera</name>
<affiliation>
<nlm:affiliation>North Dakota State University, Fargo 58108.</nlm:affiliation>
<wicri:noCountry code="subField">Fargo 58108</wicri:noCountry>
</affiliation>
</author>
<author>
<name sortKey="Secor, G" sort="Secor, G" uniqKey="Secor G" first="G" last="Secor">G. Secor</name>
<affiliation>
<nlm:affiliation>North Dakota State University, Fargo 58108.</nlm:affiliation>
<wicri:noCountry code="subField">Fargo 58108</wicri:noCountry>
</affiliation>
</author>
<author>
<name sortKey="Bolton, M" sort="Bolton, M" uniqKey="Bolton M" first="M" last="Bolton">M. Bolton</name>
<affiliation wicri:level="2">
<nlm:affiliation>USDA-ARS, Northern Crop Science Lab, Fargo, ND.</nlm:affiliation>
<country xml:lang="fr">États-Unis</country>
<placeName>
<region type="state">Dakota du Nord</region>
</placeName>
<wicri:cityArea>USDA-ARS, Northern Crop Science Lab, Fargo</wicri:cityArea>
</affiliation>
</author>
<author>
<name sortKey="France, A" sort="France, A" uniqKey="France A" first="A" last="France">A. France</name>
<affiliation wicri:level="1">
<nlm:affiliation>Instituto de Investigaciones Agropecuarias, Chillán, Chile.</nlm:affiliation>
<country xml:lang="fr">Chili</country>
<wicri:regionArea>Instituto de Investigaciones Agropecuarias, Chillán</wicri:regionArea>
<wicri:noRegion>Chillán</wicri:noRegion>
</affiliation>
</author>
</analytic>
<series>
<title level="j">Plant disease</title>
<idno type="ISSN">0191-2917</idno>
<imprint>
<date when="2012" type="published">2012</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc>
<textClass></textClass>
</profileDesc>
</teiHeader>
<front>
<div type="abstract" xml:lang="en">Chicory (Cichorium intybus L. var sativum Bisch.), a relatively new high-value crop in Chile, was introduced for commercial production of inulin. Inulins are polysaccharides extracted from chicory tap roots that are used in processed foods because of their beneficial gastrointestinal properties. Approximately 3,000 ha of chicory are grown for local processing in the BioBio Region near Chillan in south central Chile. Recently, a severe rot of 1 to 3% of mature roots in the field and after harvest has been observed in most fields, which caused yield and quality losses. Typical symptoms include a brown discoloration and a soft, watery decay of the root. Tissue pieces from symptomatic roots were placed on water agar and clarified V8 juice agar medium amended with antibiotics (1) for isolation of the causal pathogen. A Phytopthora sp. had been consistently isolated from root lesions, and axenic cultures were obtained using single-hypha transfers. The species was provisionally identified as Phytopthora cryptogea (Pethybridge and Lafferty, 1919) on the basis of morphological and cultural characteristics (1). Mycelia grew between 5 and 30°C with optimal growth at 20 to 25°C and no growth at 35°C. All isolates produced hyphal swellings and nonpapillate, persistent, internally proliferating, and ovoid to obpyriform sporangia with mean dimensions of 45 × 31 μm in sterile soil extract. The isolates were of A1 mating type because they produced oospores only when paired with reference isolates of P. cinnamomi A2 on clarified V8 juice agar amended with thiamine, tryptophan, and β-sitosterol (1) after 20 days at 20°C in the dark. On the basis of morphological and sequence data from cytochrome c oxidase subunit 1 and 2, internal transcribed spacer 2, and β-tubulin (GenBank Accession Nos. JQ037796 to JQ037798, respectively), the pathogen was identified as P. cryptogea. Pathogenicity tests were conducted using three isolates of P. cryptogea by placing a 7-mm-diameter disk from a 1-week-old V8 agar culture on 10 wounded and nonwounded healthy chicory roots (2). Control roots were mock inoculated with agar plugs. The inoculated roots were incubated at 20°C in a moist chamber. Root rot symptoms, identical to those observed both in field and storage, developed after 4 to 6 days only on wounded sites inoculated with the pathogen, and P. cryptogea was reisolated from these inoculated plants. Mock-inoculated roots remained healthy. This experiment was completed twice and similar results were obtained. To our knowledge, this is the first report of Phytophthora root rot of chicory caused by P. cryptogea in Chile. References: (1) D. C. Erwin and O. K. Ribeiro. Phytophthora Diseases Worldwide. The American Phytopathological Society, St. Paul, MN, 1996. (2) M. E. Stanghellini and W. C. Kronland. Plant Dis. 66:262, 1982.</div>
</front>
</TEI>
<pubmed>
<MedlineCitation Status="PubMed-not-MEDLINE" Owner="NLM">
<PMID Version="1">30727403</PMID>
<DateRevised>
<Year>2019</Year>
<Month>11</Month>
<Day>20</Day>
</DateRevised>
<Article PubModel="Print">
<Journal>
<ISSN IssnType="Print">0191-2917</ISSN>
<JournalIssue CitedMedium="Print">
<Volume>96</Volume>
<Issue>4</Issue>
<PubDate>
<Year>2012</Year>
<Month>Apr</Month>
</PubDate>
</JournalIssue>
<Title>Plant disease</Title>
<ISOAbbreviation>Plant Dis</ISOAbbreviation>
</Journal>
<ArticleTitle>First Report of Root Rot of Chicory Caused by Phytophthora cryptogea in Chile.</ArticleTitle>
<Pagination>
<MedlinePgn>591</MedlinePgn>
</Pagination>
<ELocationID EIdType="doi" ValidYN="Y">10.1094/PDIS-03-11-0245</ELocationID>
<Abstract>
<AbstractText>Chicory (Cichorium intybus L. var sativum Bisch.), a relatively new high-value crop in Chile, was introduced for commercial production of inulin. Inulins are polysaccharides extracted from chicory tap roots that are used in processed foods because of their beneficial gastrointestinal properties. Approximately 3,000 ha of chicory are grown for local processing in the BioBio Region near Chillan in south central Chile. Recently, a severe rot of 1 to 3% of mature roots in the field and after harvest has been observed in most fields, which caused yield and quality losses. Typical symptoms include a brown discoloration and a soft, watery decay of the root. Tissue pieces from symptomatic roots were placed on water agar and clarified V8 juice agar medium amended with antibiotics (1) for isolation of the causal pathogen. A Phytopthora sp. had been consistently isolated from root lesions, and axenic cultures were obtained using single-hypha transfers. The species was provisionally identified as Phytopthora cryptogea (Pethybridge and Lafferty, 1919) on the basis of morphological and cultural characteristics (1). Mycelia grew between 5 and 30°C with optimal growth at 20 to 25°C and no growth at 35°C. All isolates produced hyphal swellings and nonpapillate, persistent, internally proliferating, and ovoid to obpyriform sporangia with mean dimensions of 45 × 31 μm in sterile soil extract. The isolates were of A1 mating type because they produced oospores only when paired with reference isolates of P. cinnamomi A2 on clarified V8 juice agar amended with thiamine, tryptophan, and β-sitosterol (1) after 20 days at 20°C in the dark. On the basis of morphological and sequence data from cytochrome c oxidase subunit 1 and 2, internal transcribed spacer 2, and β-tubulin (GenBank Accession Nos. JQ037796 to JQ037798, respectively), the pathogen was identified as P. cryptogea. Pathogenicity tests were conducted using three isolates of P. cryptogea by placing a 7-mm-diameter disk from a 1-week-old V8 agar culture on 10 wounded and nonwounded healthy chicory roots (2). Control roots were mock inoculated with agar plugs. The inoculated roots were incubated at 20°C in a moist chamber. Root rot symptoms, identical to those observed both in field and storage, developed after 4 to 6 days only on wounded sites inoculated with the pathogen, and P. cryptogea was reisolated from these inoculated plants. Mock-inoculated roots remained healthy. This experiment was completed twice and similar results were obtained. To our knowledge, this is the first report of Phytophthora root rot of chicory caused by P. cryptogea in Chile. References: (1) D. C. Erwin and O. K. Ribeiro. Phytophthora Diseases Worldwide. The American Phytopathological Society, St. Paul, MN, 1996. (2) M. E. Stanghellini and W. C. Kronland. Plant Dis. 66:262, 1982.</AbstractText>
</Abstract>
<AuthorList CompleteYN="Y">
<Author ValidYN="Y">
<LastName>Vargas</LastName>
<ForeName>M</ForeName>
<Initials>M</Initials>
<AffiliationInfo>
<Affiliation>Facultad de Agronomía, Universidad de Concepción, Chillán, Chile.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Loyola</LastName>
<ForeName>C</ForeName>
<Initials>C</Initials>
<AffiliationInfo>
<Affiliation>Facultad de Agronomía, Universidad de Concepción, Chillán, Chile.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Zapata</LastName>
<ForeName>N</ForeName>
<Initials>N</Initials>
<AffiliationInfo>
<Affiliation>Facultad de Agronomía, Universidad de Concepción, Chillán, Chile.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Rivera</LastName>
<ForeName>V</ForeName>
<Initials>V</Initials>
<AffiliationInfo>
<Affiliation>North Dakota State University, Fargo 58108.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Secor</LastName>
<ForeName>G</ForeName>
<Initials>G</Initials>
<AffiliationInfo>
<Affiliation>North Dakota State University, Fargo 58108.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Bolton</LastName>
<ForeName>M</ForeName>
<Initials>M</Initials>
<AffiliationInfo>
<Affiliation>USDA-ARS, Northern Crop Science Lab, Fargo, ND.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>France</LastName>
<ForeName>A</ForeName>
<Initials>A</Initials>
<AffiliationInfo>
<Affiliation>Instituto de Investigaciones Agropecuarias, Chillán, Chile.</Affiliation>
</AffiliationInfo>
</Author>
</AuthorList>
<Language>eng</Language>
<PublicationTypeList>
<PublicationType UI="D016428">Journal Article</PublicationType>
</PublicationTypeList>
</Article>
<MedlineJournalInfo>
<Country>United States</Country>
<MedlineTA>Plant Dis</MedlineTA>
<NlmUniqueID>9882809</NlmUniqueID>
<ISSNLinking>0191-2917</ISSNLinking>
</MedlineJournalInfo>
</MedlineCitation>
<PubmedData>
<History>
<PubMedPubDate PubStatus="entrez">
<Year>2019</Year>
<Month>2</Month>
<Day>8</Day>
<Hour>6</Hour>
<Minute>0</Minute>
</PubMedPubDate>
<PubMedPubDate PubStatus="pubmed">
<Year>2012</Year>
<Month>4</Month>
<Day>1</Day>
<Hour>0</Hour>
<Minute>0</Minute>
</PubMedPubDate>
<PubMedPubDate PubStatus="medline">
<Year>2012</Year>
<Month>4</Month>
<Day>1</Day>
<Hour>0</Hour>
<Minute>1</Minute>
</PubMedPubDate>
</History>
<PublicationStatus>ppublish</PublicationStatus>
<ArticleIdList>
<ArticleId IdType="pubmed">30727403</ArticleId>
<ArticleId IdType="doi">10.1094/PDIS-03-11-0245</ArticleId>
</ArticleIdList>
</PubmedData>
</pubmed>
<affiliations>
<list>
<country>
<li>Chili</li>
<li>États-Unis</li>
</country>
<region>
<li>Dakota du Nord</li>
</region>
</list>
<tree>
<noCountry>
<name sortKey="Rivera, V" sort="Rivera, V" uniqKey="Rivera V" first="V" last="Rivera">V. Rivera</name>
<name sortKey="Secor, G" sort="Secor, G" uniqKey="Secor G" first="G" last="Secor">G. Secor</name>
</noCountry>
<country name="Chili">
<noRegion>
<name sortKey="Vargas, M" sort="Vargas, M" uniqKey="Vargas M" first="M" last="Vargas">M. Vargas</name>
</noRegion>
<name sortKey="France, A" sort="France, A" uniqKey="France A" first="A" last="France">A. France</name>
<name sortKey="Loyola, C" sort="Loyola, C" uniqKey="Loyola C" first="C" last="Loyola">C. Loyola</name>
<name sortKey="Zapata, N" sort="Zapata, N" uniqKey="Zapata N" first="N" last="Zapata">N. Zapata</name>
</country>
<country name="États-Unis">
<region name="Dakota du Nord">
<name sortKey="Bolton, M" sort="Bolton, M" uniqKey="Bolton M" first="M" last="Bolton">M. Bolton</name>
</region>
</country>
</tree>
</affiliations>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Bois/explor/PhytophthoraV1/Data/Main/Exploration
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 001527 | SxmlIndent | more

Ou

HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 001527 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Bois
   |area=    PhytophthoraV1
   |flux=    Main
   |étape=   Exploration
   |type=    RBID
   |clé=     pubmed:30727403
   |texte=   First Report of Root Rot of Chicory Caused by Phytophthora cryptogea in Chile.
}}

Pour générer des pages wiki

HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i   -Sk "pubmed:30727403" \
       | HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd   \
       | NlmPubMed2Wicri -a PhytophthoraV1 

Wicri

This area was generated with Dilib version V0.6.38.
Data generation: Fri Nov 20 11:20:57 2020. Site generation: Wed Mar 6 16:48:20 2024